César Parra Rojas

César Parra Rojas

Data Scientist | Post-doctoral fellow at FIAS

Publications

You can always find an updated list of my publications on my Google Scholar profile.

Journal articles

  1. Quantitative modeling of the function of kinetically driven transcriptional riboswitches. C. Parra-Rojas, B. Fürtig, H. Schwalbe, and E. A. Hernandez-Vargas (submitted).

  2. PDEparams: Parameter fitting toolbox for partial differential equations in Python. C. Parra-Rojas, and E. A. Hernandez-Vargas (submitted).

    bioRxiv preprintGitHub repository

  3. Cyclo(tetrahydroxybutyrate) production is sufficient to distinguish between Xenorhabdus and Photorhabdus isolates in Thailand. N. J. Tobias, C. Parra-Rojas, Y.-N. Shi, Y.-M. Shi, S. Simonyi, A. Thanwisai, A. Vitta, N. Chantratita, E. A. Hernandez-Vargas, and H. B. Bode. Environ. Microbiol. 21(8), 2921 (2019).

    PDFjournal websitebioRxiv preprintGitHub repository

  4. The trichotomy of pneumococcal infection outcomes in the host. A. E. S. Almocera, G. Hernández-Mejía, C. Parra-Rojas, and E. A. Hernandez-Vargas. Commun. Nonlinear Sci. Numer. Simulat. 73, 1 (2019).

    PDFjournal websitebioRxiv preprint

  5. Adjuvanted influenza vaccine dynamics. C. Parra-Rojas, V. von Messling, and E. A. Hernandez-Vargas. Scientific Reports 9, 73 (2019).

    PDFjournal websiteGitHub repository

  6. Neuraminidase Inhibitors in Influenza Treatment and Prevention–Is It Time to Call It a Day?. C. Parra-Rojas, V. K. Nguyen, G. Hernández-Mejía, and E. A. Hernandez-Vargas. Viruses 10(9), 454 (2018).

    PDFjournal websiteGitHub repository

  7. The 2017 plague outbreak in Madagascar: data descriptions and epidemic modelling. V. K. Nguyen, C. Parra-Rojas, and E. A. Hernandez-Vargas. Epidemics 25, 20 (2018).

    PDFjournal websitebioRxiv preprintGitHub repository

  8. Reduction of a metapopulation genetic model to an effective one island model. C. Parra-Rojas, and A. J. McKane. Europhys. Lett. 122, 18001 (2018).

    PDFarXiv preprintjournal website

  9. Stochastic epidemic dynamics on extremely heterogeneous networks. C. Parra-Rojas, T. House, and A. J. McKane. Phys. Rev. E 94(6), 062408 (2016).

    PDFarXiv preprintjournal website

  10. Suppressing escape events in maps of the unit interval with demographic noise. C. Parra-Rojas, J. D. Challenger, D. Fanelli, and A. J. McKane. Phys. Rev. E 94(5), 052133 (2016).

    PDFarXiv preprintjournal website

  11. Intrinsic noise and two-dimensional maps: Quasicycles, quasiperiodicity, and chaos. C. Parra-Rojas, J. D. Challenger, D. Fanelli, and A. J. McKane. Phys. Rev. E 90(3), 032135 (2014).

    PDFarXiv preprintjournal website

  12. Casimir effect in swimmer suspensions. C. Parra-Rojas, and R. Soto. Phys. Rev. E 90(1), 013024 (2014).

    PDFarXiv preprintjournal website

  13. Active temperature and velocity correlations produced by a swimmer suspension. C. Parra-Rojas, and R. Soto. Phys. Rev. E 87(5), 053022 (2013).

    PDFarXiv preprintjournal website

  14. Pd2+/Pd0 redox cycling in hexagonal YMn0.5Fe0.5O3: Implications for catalysis by PGM substituted complex oxides. J. A. Kurzman, J. Li, T. D. Schladt, C. R. Parra, X. Ouyang, R. Davis, J. T. Miller, S. L. Scott, and R. Seshadri. Inorg. Chem. 50, 8073–8084 (2011).

    PDFjournal website

Conference proceedings

  1. From Microscopic Calcium Sparks to the ECG: Model Reduction Approaches for Multi-Scale Cardiac Simulation. M. A. Colman, C. Parra-Rojas, and E. A. Pérez Alday. Computing in Cardiology (CinC), 325–328 (2015).

    PDFjournal website